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_loc_flanking_seq

Contents

Description

Flanking DNA surrounding the variant. This table is derived mainly from the dbSNP SubSNPSeq tables, such as SubSNPSeq3_ins and SubSNPSeq3_p1_human. Sequence in lower case is used for sequence identified by RepeatMasker as low-complexity or repetitive elements. In the dbSNP-Q query tool the DNA sequence is separated by spaces every 10 bases, but this is for display only; in the database there are no spaces in the DNA sequence.

Columns

The following are the columns in the table _loc_flanking_seq. Click on the name of a column for more detailed information (when available).

Data

Click the button below to view data from this table in the BioQ query tool.

Browse Data

Experimental Process Flow

Click on the items in the diagrams for additional information.

Back Trace

This shows the path of experimental process flow leading up to the table _loc_flanking_seq when it is part of the output of some process. A back trace was not possible in this case - the table _loc_flanking_seq may be reference data.

Full Trace

This shows the bidirectional experimental process flow from the table _loc_flanking_seq including cases where it is reference data. A full trace was not possible in this case -the table _loc_flanking_seq may be reference data.